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1 read a table; capture prov info

source(file.path(dir_test, 'test_source.R'))
## File `~/github/ohibc/rmd_testing/tableA.csv`: most recent commit info: commit 8b48c047ef11e01d13c8b61e83e8edc6cce99cf9 Author: Casey O'Hara <ohara@nceas.ucsb.edu> Date:   Sat Apr 30 12:01:16 2016 -0700; uncommitted changes = FALSE
## File `~/github/ohibc/rmd_testing/tableB.csv`: most recent commit info: commit 00b6e10615d39b60a92958f7d8887c9e1091af54 Author: Casey O'Hara <ohara@nceas.ucsb.edu> Date:   Sat Apr 30 10:25:32 2016 -0700; uncommitted changes = FALSE
## File `~/github/ohibc/rmd_testing/tableC.csv`: most recent commit info: commit 00b6e10615d39b60a92958f7d8887c9e1091af54 Author: Casey O'Hara <ohara@nceas.ucsb.edu> Date:   Sat Apr 30 10:25:32 2016 -0700; uncommitted changes = FALSE
## File `~/github/ohibc/rmd_testing/table1.csv`: most recent commit info: commit 893b6768bfa73aae999c60b5c61cdfd2e501944e Author: Casey O'Hara <ohara@nceas.ucsb.edu> Date:   Fri Nov 13 11:03:56 2015 -0800; uncommitted changes = FALSE
## File `~/github/ohibc/rmd_testing/test_source.R`: most recent commit info: commit 8b48c047ef11e01d13c8b61e83e8edc6cce99cf9 Author: Casey O'Hara <ohara@nceas.ucsb.edu> Date:   Sat Apr 30 12:01:16 2016 -0700; uncommitted changes = FALSE
# tableA      <- read_csv(tableA_file)
# 
# write_csv(tableA, tableB_file)


3 Provenance

## Warning in left_join_impl(x, y, by$x, by$y): joining factor and character
## vector, coercing into character vector
## Warning in left_join_impl(x, y, by$x, by$y): joining factor and character
## vector, coercing into character vector

Provenance summary for run 47: standard run (Mon May 2 12:42:13 2016)
file_name file_dir filetype uncomm_chgs commit_id
table1.csv /Users/caseyohara/github/ohibc/rmd_testing input FALSE 01944e
table1.csv /Users/caseyohara/github/ohibc/rmd_testing input FALSE 01944e
tableA.csv /Users/caseyohara/github/ohibc/rmd_testing input FALSE e99cf9
table2.csv /Users/caseyohara/github/ohibc/rmd_testing output FALSE 91af54
table2.csv /Users/caseyohara/github/ohibc/rmd_testing output FALSE 91af54
table3.csv /Users/caseyohara/github/ohibc/rmd_testing output FALSE 91af54
tableB.csv /Users/caseyohara/github/ohibc/rmd_testing output FALSE 91af54
tableC.csv /Users/caseyohara/github/ohibc/rmd_testing output FALSE 91af54
test.Rmd /Users/caseyohara/github/ohibc/rmd_testing script TRUE e99cf9
test_source.R /Users/caseyohara/github/ohibc/rmd_testing sourced_script FALSE e99cf9